Please use this identifier to cite or link to this item: https://rima.ufrrj.br/jspui/handle/20.500.14407/17637
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dc.contributor.authorHolmström, Thérèsse Camille Nascimento-
dc.date.accessioned2024-07-17T14:57:52Z-
dc.date.available2024-07-17T14:57:52Z-
dc.date.issued2022-03-22-
dc.identifier.citationHOLMSTRÖM, Thérèsse Camille Nascimento. Desafios na caracterização e na análise da resistência antimicrobiana de espécies bacterianas na medicina veterinária com uma abordagem em saúde única. 2022. 109 f. Tese (Doutorado em Ciências Veterinárias) - Instituto de Veterinária, Universidade Federal Rural do Rio de Janeiro, Seropédica, 2022.pt_BR
dc.identifier.urihttps://rima.ufrrj.br/jspui/handle/20.500.14407/17637-
dc.description.abstractAo longo das últimas décadas, múltiplos fatores como o estreitamento da relação entre humanos e animais de estimação, as mudanças ambientais decorrentes da urbanização de áreas periurbanas e rurais, a significativa intensificação da produção animal, acarretaram uma significativa mudança na dinâmica homem-animal com consequente aumento da circulação de patógenos bacterianos entre humanos e animais e a emergência e reemergência de doenças. A identificação de bactérias emergentes na rotina do diagnóstico veterinário tem se apresentado como um grande desafio, uma vez que, geralmente, estes patógenos não possuem estudos de referência a partir das amostras oriundas do ambiente animal, e por vezes, metodologias desenvolvidas para amostras de origem humana não se mostram efetivas para sua identificação. Outro aspecto associado a tal emergência é a circulação de genes de resistência apontando para a importância de caracterizar a resistência antimicrobiana de espécies bacterianas oriundas de diferentes ambientes animais. Neste trabalho foram caracterizadas espécies bacterianas e seu respectivo perfil de resistência oriundas de animais silvestres, produção avícola e amostras laboratoriais clínicas de diferentes espécies. Amostras oriundas de diferentes espécies de animais selvagens, como maritacas, jabutis, cachorro do mato e mão pelada, forneceram 103 cepas da família Enterobacterales, 28 Staphylococcus spp., 2 Streptococcus spp. e 1 Enterococcus spp. Uma cepa de Pantoea dispersa isolada de maritaca foi detectada albergando o gene de resistência à colistina mcr-9. A partir das amostras de jabuti, foram detectadas 2 amostras apresentando o gene de resistência blaTEM, 1 apresentou o gene blaCTX e 1 apresentou ambos os genes. Dentre as amostras da produção avícola os isolados de Enteobacterales revelaram 45,45% (20/44) de cepas produtoras de ESBL, sendo 35% (9/20) blaSHV, 20% (4/20) blaCTX-M, 15% (3/20) blaTEM, 10% (2/20) apresentando os genes blaSHV e blaCTX, e 10% (2/20) apresentando blaSHV e blaTEM, simultaneamente. Dentre as 51 cepas de Enterococcus spp, 1 cepa de E. faecium oriunda de cloaca de pinto foi identificado o gene vanB e em 1 cepa de E. faecalis de frango adulto foram identificados vanA e vanB, simultaneamente. Destas mesmas 51 cepas 23,53% (12/51) apresentaram resistência a estreptomicina. Dentre as 25 cepas de Staphylococcus spp. foi detectado 1 isolado com o gene mecA. A cama de maravalha utilizada pelos animais da avicultura também foi avaliada e foi detectado 1 amostra positiva para o gene blaVIM. As 35 cepas de Acinetobacter spp. foram identificadas por análise proteômica, genotípica e sequenciamento. Para avaliar a diferença entre as técnicas foi utilizado o teste de Kappa entre MALDI-TOF e PCR, MALDI-TOF e rpoB, PCR e rpoB, e entre as três técnicas. O perfil de resistência dessas amostras também foi avaliado, sendo 54,28% (19/35) classificadas como MDR, 51,42% (18/35) apresentaram 1 ou mais genes de ESBL, sendo 4 cepas com gene blaCTX, 1 cepa com blaSHV, 9 cepas com blaTEM, 3 cepas com blaCTX e blaTEM e 1 cepa com blaSHV e blaTEM. O presente trabalho buscou identificar bactérias e detectar genes de resistência em diferentes ambientes veterinários. Este é um grande desafio principalmente porque há poucos trabalhos e ausência de padrões de análise fenotípica sobre isolados de origem animal. O papel do animal silvestre, de produção ou de companhia tem relevante participação na disseminação de genes de resistência no ambiente, enfatizando a Saúde Única e gerando um alerta quanto ao foco de novos estudos para entender e avaliar ambientes veterinários.pt_BR
dc.description.sponsorshipCoordenação de Aperfeiçoamento de Pessoal de Nível Superior - CAPESpt_BR
dc.languageporpt_BR
dc.publisherUniversidade Federal Rural do Rio de Janeiropt_BR
dc.subjectgenes de resistênciapt_BR
dc.subjectpatógenos bacterianospt_BR
dc.subjectSaúde Únicapt_BR
dc.subjectbacterial pathogenspt_BR
dc.subjectresistance genespt_BR
dc.subjectOne Healthpt_BR
dc.titleDesafios na caracterização e na análise da resistência antimicrobiana de espécies bacterianas na medicina veterinária com uma abordagem em saúde únicapt_BR
dc.typeTesept_BR
dc.description.abstractOtherOver the last decades, multiple factors such as the strengthening of the relationship between humans and pets, environmental changes resulting from the urbanization of peri-urban and rural areas, the significant intensification of animal production have led to a significant change in the human-animal dynamics with consequently increased circulation of bacterial pathogens between humans and animals and the emergence and re-emergence of diseases. Identifying emerging bacteria in the routine of veterinary diagnosis has been presented as a great challenge. Generally, these pathogens do not have reference studies from samples from the animal environment, and sometimes methodologies developed for samples of human origin are not effective for its identification. Another aspect associated with this emergence is the circulation of resistance genes, pointing to the importance of characterizing the antimicrobial resistance of bacterial species from different animal environments. This work characterized bacterial species and their respective resistance profile from wild animals, poultry production, and clinical laboratory samples of different species. Samples from different wild animal species, such as maritacas, jabutism, cachorro do mato and mão pelada, provided 103 isolates of the Enterobacterales family, 28 Staphylococcus spp, 2 Streptococcus spp and 1 Enterococcus spp. A strain of Pantoea dispersa isolated from maritaca was detected harboring the colistin resistance gene mcr-9. From the tortoise samples, 2 samples were detected presenting the blaTEM resistance gene, 1 presented the blaCTX gene and 1 presented both genes. Among the samples of poultry production, Enteobacterales strains revealed 45.45% (20/44) of ESBL-producing strains, with 35% (9/20) blaSHV, 20% (4/20) blaCTX-M, 15% (3/20) blaTEM, 10% (2/20) showing the blaSHV and blaCTX genes, and 10% (2/20) showing blaSHV and blaTEM, simultaneously. Among the 51 strains of Enterococcus spp (51 strains), 1 strain of E. faecium from chick cloaca was identified with the vanB gene and in 1 strain of E. faecalis from adult chicken, vanA and vanB were identified simultaneously. Of these same 51 strains, 23.53% (12/51) showed resistance to streptomycin. Among the 25 strains of Staphylococcus spp. 1 isolate with the mecA gene was detected. The poultry litter was also evaluated and 01 positive sample for the blaVIM gene was detected. The 35 strains of Acinetobacter spp. were identified by proteomic, genotypic and sequencing analysis, to assess the difference between the techniques, the Kappa test was used to compare MALDI-TOF and PCR, MALDI-TOF and rpoB, PCR and rpoB, and between the three techniques. The resistance profile of these samples was also evaluated, with 54.28% (19/35) classified as MDR, 51.42% (18/35) had 01 or more ESBL genes, with 04 strains with the blaCTX gene, 01 strain with blaSHV, 09 strains with blaTEM, 03 strains with blaCTX and blaTEM and 01 strain with blaSHV and blaTEM. The present work sought to identify bacteria and detect resistance genes in different veterinary environments. This is a big challenge mainly because there are still few works and phenotypic analysis standards on animal themes. The role of wild, production, or companion animal has great participation in disseminating resistance gene in the environment, emphasizing One Health and generating an alert as to the focus of new studies to understand and evaluate veterinary environments.en
dc.contributor.advisor1Souza, Miliane Moreira Soares de-
dc.contributor.advisor1Latteshttp://lattes.cnpq.br/0865211214618618pt_BR
dc.contributor.advisor-co1Coelho, Irene da Silva-
dc.contributor.advisor-co1Latteshttp://lattes.cnpq.br/2191695584157582pt_BR
dc.contributor.advisor-co2Melo, Dayanne Araujo de-
dc.contributor.advisor-co2Latteshttp://lattes.cnpq.br/1205965922491865pt_BR
dc.contributor.referee1Soares, Lidiane de Castro-
dc.contributor.referee1Latteshttp://lattes.cnpq.br/7426431710199990pt_BR
dc.contributor.referee2Souza, Miliane Moreira Soares de-
dc.contributor.referee2Latteshttp://lattes.cnpq.br/0865211214618618pt_BR
dc.contributor.referee3Maboni, Grazieli-
dc.contributor.referee3Latteshttp://lattes.cnpq.br/9416154230640250pt_BR
dc.contributor.referee4Anzai, Eleine Kuroki-
dc.contributor.referee4Latteshttp://lattes.cnpq.br/6430630810174173pt_BR
dc.contributor.referee5Souza, Cláudio Marcos Rocha de-
dc.contributor.referee5Latteshttp://lattes.cnpq.br/7903354651687538pt_BR
dc.creator.Latteshttp://lattes.cnpq.br/8222063891834662pt_BR
dc.publisher.countryBrasilpt_BR
dc.publisher.departmentInstituto de Veterináriapt_BR
dc.publisher.initialsUFRRJpt_BR
dc.publisher.programPrograma de Pós-Graduação em Ciências Veterináriaspt_BR
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